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# performance_analysis

This software/script  calculates all the following important performance metrics:
- Dice Similarity Index(SI) 
- Sensitivity  
- Precision  
- Specificity 
- Jaccardindex  
- Conformity 
- HausdorffDistance
- Overlapcoefficient 
- Tanimotocoefficient
- Matthewscorrelationcoefficient  
- Accuracy 
- Voxel-level false discovery rate(FDR) 
- Voxel-level false negative ratio(FNR)
- Cluster-level FDR 
- Cluster-level FNR 
- Detection error rate(DER) 
- utline error rate(OER)
- Mean Total Area(MTA)
- Volume of segmentation
- Volume of manual mask