Commit 8811f9b7 authored by Gergely Zombori's avatar Gergely Zombori

Ticket #12: Changed file extensions from '*.something' to 'something' so the...

Ticket #12: Changed file extensions from '*.something' to 'something' so the MITK CLI plugin handles them correctly
parent c47108e9
......@@ -18,7 +18,7 @@ char xml_aladin[] =
" <parameters advanced=\"false\">\n"
" <label>Input images. Reference and floating images are mandatory</label>\n"
" <description>Input images to perform the registration</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>referenceImageName</name>\n"
" <longflag>ref</longflag>\n"
" <description>Reference image filename (also called Target or Fixed)</description>\n"
......@@ -26,7 +26,7 @@ char xml_aladin[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>floatingImageName</name>\n"
" <longflag>flo</longflag>\n"
" <description>Floating image filename (also called Source or moving)</description>\n"
......@@ -34,7 +34,7 @@ char xml_aladin[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>referenceMaskImageName</name>\n"
" <longflag>rmask</longflag>\n"
" <description>Filename of a mask image in the reference space</description>\n"
......@@ -42,7 +42,7 @@ char xml_aladin[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>floatingMaskImageName</name>\n"
" <longflag>fmask</longflag>\n"
" <description>Filename of a mask image in the floating space. Only used when symmetric turned on</description>\n"
......
......@@ -18,7 +18,7 @@ char xml_f3d[] =
" <parameters advanced=\"false\">\n"
" <label>Input images. Reference and floating images are mandatory</label>\n"
" <description>Input images to perform the registration</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>referenceImageName</name>\n"
" <longflag>ref</longflag>\n"
" <description>Reference image filename (also called Target or Fixed)</description>\n"
......@@ -26,7 +26,7 @@ char xml_f3d[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>floatingImageName</name>\n"
" <longflag>flo</longflag>\n"
" <description>Floating image filename (also called Source or moving)</description>\n"
......@@ -34,7 +34,7 @@ char xml_f3d[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>referenceMaskImageName</name>\n"
" <longflag>rmask</longflag>\n"
" <description>Reference mask image filename</description>\n"
......@@ -79,7 +79,7 @@ char xml_f3d[] =
" <longflag>res</longflag>\n"
" <description>Warped floating image</description>\n"
" <label>Output warped image</label>\n"
" <default>outputResult</default>\n"
" <default>outputResult.nii</default>\n"
" <channel>output</channel>\n"
" </image>"
" </parameters>\n"
......
......@@ -25,7 +25,7 @@ char xml_jacobian[] =
" <parameters advanced=\"false\">\n"
" <label>Input reference image</label>\n"
" <description>Input images</description>\n"
" <file fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.txt,.mat\">\n"
" <file fileExtensions=\"nii,nii.gz,nrrd,txt,mat\">\n"
" <name>InTrans</name>\n"
" <longflag>trans</longflag>\n"
" <description>Input transformation</description>\n"
......@@ -33,7 +33,7 @@ char xml_jacobian[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </file>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>referenceImageName</name>\n"
" <longflag>ref</longflag>\n"
" <description>Reference image filename, required if the transformation is a spline parametrisation</description>\n"
......@@ -50,7 +50,7 @@ char xml_jacobian[] =
" <longflag>jac</longflag>\n"
" <description>Jacobian determinant image</description>\n"
" <label>Jac. det. image</label>\n"
" <default></default>\n"
" <default>jacDetImage.nii</default>\n"
" <channel>output</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
......@@ -58,7 +58,7 @@ char xml_jacobian[] =
" <longflag>jacL</longflag>\n"
" <description>Log of the Jacobian determinant image</description>\n"
" <label>Log. Jac. det. image</label>\n"
" <default></default>\n"
" <default>logJacDetImage.nii</default>\n"
" <channel>output</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
......@@ -66,7 +66,7 @@ char xml_jacobian[] =
" <longflag>jacM</longflag>\n"
" <description>Jacobian matrix image</description>\n"
" <label>Jac. mat. image</label>\n"
" <default></default>\n"
" <default>JacMatImage.nii</default>\n"
" <channel>output</channel>\n"
" </image>"
" </parameters>\n"
......
......@@ -25,7 +25,7 @@ char xml_resample[] =
" <parameters advanced=\"false\">\n"
" <label>Input images. Reference and floating images are mandatory</label>\n"
" <description>Input images</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>referenceImageName</name>\n"
" <longflag>ref</longflag>\n"
" <description>Reference image filename (also called Target of Fixed)</description>\n"
......@@ -33,7 +33,7 @@ char xml_resample[] =
" <default>required</default>\n"
" <channel>input</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">"
" <name>floatingImageName</name>\n"
" <longflag>flo</longflag>\n"
" <description>Floating image filename (also called Source of moving)</description>\n"
......@@ -58,19 +58,19 @@ char xml_resample[] =
" <label>Output image</label>\n"
" <description>Resampled images using the provided transformation</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <name>warpedImage</name>\n"
" <name>warpedImage.nii</name>\n"
" <longflag>res</longflag>\n"
" <description>Warped floating image</description>\n"
" <label>Warped image</label>\n"
" <default></default>\n"
" <default>warpedImage</default>\n"
" <channel>output</channel>\n"
" </image>"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">"
" <name>warpedGrid</name>\n"
" <name>warpedGrid.nii</name>\n"
" <longflag>blank</longflag>\n"
" <description>Warped blank grid image</description>\n"
" <label>Grid image</label>\n"
" <default></default>\n"
" <default>warpedGrid</default>\n"
" <channel>output</channel>\n"
" </image>"
" </parameters>\n"
......
......@@ -24,7 +24,7 @@ char xml_tools[] =
" <parameters advanced=\"false\">\n"
" <label>Input and Output</label>\n"
" <description>Input image (mandatory)</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>inputImageName</name>\n"
" <longflag>in</longflag>\n"
" <description>Input image filename</description>\n"
......@@ -125,7 +125,7 @@ char xml_tools[] =
" <parameters advanced=\"true\">\n"
" <label>Options</label>\n"
" <description>Various image processing tasks that require two images.</description>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>rmsImages</name>\n"
" <longflag>rms</longflag>\n"
" <description>Compute the mean rms between this image and the input image</description>\n"
......@@ -133,7 +133,7 @@ char xml_tools[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>maskImage</name>\n"
" <longflag>nan</longflag>\n"
" <description>This image is used to mask the input image. Voxels outside of the mask are set to nan</description>\n"
......@@ -141,7 +141,7 @@ char xml_tools[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>addImage</name>\n"
" <longflag>add</longflag>\n"
" <description>This image is added to the input image</description>\n"
......@@ -149,7 +149,7 @@ char xml_tools[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>subtractImage</name>\n"
" <longflag>sub</longflag>\n"
" <description>This image is subtracted from the input image</description>\n"
......@@ -157,7 +157,7 @@ char xml_tools[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>multiplyImage</name>\n"
" <longflag>mul</longflag>\n"
" <description>This image is multiplied with input image</description>\n"
......@@ -165,7 +165,7 @@ char xml_tools[] =
" <default></default>\n"
" <channel>input</channel>\n"
" </image>\n"
" <image fileExtensions=\"*.nii,*.nii.gz,*.nrrd,*.png\">\n"
" <image fileExtensions=\"nii,nii.gz,nrrd,png\">\n"
" <name>divideImage</name>\n"
" <longflag>div</longflag>\n"
" <description>The input image is divided by this image</description>\n"
......
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